Phylogeny and cross-regulation of the YjjM and LeuO transcription factors translated as multiple protein forms from one gene in Escherichia coli

Mathematical Biology & Bioinformatics. 2023;18(1):1-14.

doi: 10.17537/2023.18.1.

• Suppl. Fig. 1. YjjM protein phylogenetic tree based on YjjM protein sequences of Escherichia coli strains and respective multiple sequence alignment. The tree was inferred using the maximum-likelihood algorithm and manually rooted using the YjjM protein sequence of Kluyvera intermedia str. N2-1 as an outgroup. Clustal X color scheme was used for alignment.
• Suppl. Fig. 2. LeuO protein phylogenetic tree based on LeuO protein sequences of Escherichia coli strains and respective multiple sequence alignment. The tree was inferred using the maximum-likelihood algorithm and manually rooted using the LeuO protein sequence of Kluyvera intermedia str. N2-1 as an outgroup. Clustal X color scheme was used for alignment.